5i. dZddlmZmZmZmZddlZddlZddlZddl Z ddl Z ddl m Z ddl Z ddlZddlZdZGddeZGdd eZGd d eZGd d eZGddeZGddeZGddeZGddeZGddeZGddeZGddeZGddeZGddeZGd d!eZGd"d#eZ Gd$d%eZ!Gd&d'e Z"Gd(d)e Z#Gd*d+eZ$Gd,d-eZ%Gd.d/eZ&Gd0d1eZ'Gd2d3e'Z(Gd4d5eZ)Gd6d7e)Z*Gd8d9eZ+Gd:d;e Z,Gd<d=e Z-Gd>d?e.Z/Gd@dAeZ0GdBdCe1Z2dDZ3dIdFZ4ejjjlejjjnejjjpejjjrejjjtejvjxejjjzejze e j|e?f Z@ ejjfZCe@eCzee+eDfzZEdEdeEddGdfdHZFy#e.fZCYxYw)Jz) Exceptions for the :mod:`dxpy` package. )print_functionunicode_literalsdivisionabsolute_importN) HTTPErrorceZdZdZy)DXErrorz*Base class for exceptions in this package.N__name__ __module__ __qualname____doc__q/home/marpiech/ifpan-abm-pgxpred/analysis/marpiech-gwas-test/venv/lib/python3.12/site-packages/dxpy/exceptions.pyr r $4rr c$eZdZdZddZdZdZy) DXAPIErrora Exception for when the API server responds with a code that is not 200 (OK). See https://documentation.dnanexus.com/developer/api/protocols#errors for complete documentation of API errors, including those reflected by subclasses of this class. c|dd|_|dd|_d|dvr|dd|_nd|_||_||_||_y)Nerrortypemessagedetails)namemsgrcode timestampreq_id)selfcontentrrrs r__init__zDXAPIError.__init__-s^G$V, 7#I. ( ("7+I6DLDL " rc |jdzt|jz}|dj|j|j z }|j |jjk7r|j dz|z}|S)z,Returns a one-line description of the error.z, code z . Request Time={}, Request ID={}: ) rstrrformatrrr __class__r r outputs r error_messagezDXAPIError.error_message8skI%DII64;;DNNDKKXX 99// /YY%.F rc|j}|jr'|dtj|jdzz }|S)Nz Details: )indent)r*rjsondumpsr(s r__str__zDXAPIError.__str__@s:##% << mdjja&HH HF rN)r1r r rrr"r*r0rrrrr's rrceZdZdZy) MalformedJSONz4 Raised when the input could not be parsed as JSON. Nr rrrr4r4Fs>rr4ceZdZdZy)InvalidAuthenticationz3 Raised when the provided OAuth2 token is invalid. Nr rrrr6r6I=rr6ceZdZdZy)PermissionDeniedz\ Raised when the supplied credentials have insufficient permissions to perform this action. Nr rrrr9r9Lsfrr9ceZdZdZy)SpendingLimitExceededzg Raised when the spending limit has been reached for the account that would be billed for this action. Nr rrrr;r;Osqrr;ceZdZdZy) OrgExpiredzP Raised when the organization that would be billed for this action has expired. Nr rrrr=r=RsZrr=ceZdZdZy)ResourceNotFoundz@ Raised when a specified entity or resource could not be found. Nr rrrr?r?UJrr?ceZdZdZy) InvalidInputz Raised when the input is syntactically correct (JSON), but semantically incorrect (for example, a JSON array is provided where a hash was required; or a required parameter was missing, etc.). Nr rrrrBrBXs[rrBceZdZdZy) InvalidStatez@ Raised when the operation is not allowed at this object state. Nr rrrrDrD\r@rrDceZdZdZy) InvalidTypezD Raised when an object specified in the request is of invalid type. Nr rrrrFrF_sNrrFceZdZdZy)RateLimitConditionalz7 Raised when the rate of invalid requests is too high. Nr rrrrHrHbArrHceZdZdZy) InternalErrorz7 Raised when the server encountered an internal error. Nr rrrrKrKerIrrKceZdZdZy)ServiceUnavailablez9 Raised when an API service was temporarily unavailable. Nr rrrrMrMhsCrrMceZdZdZy) DXFileErrorz3Exception for :class:`dxpy.bindings.dxfile.DXFile`.Nr rrrrOrOkr7rrOceZdZdZy)DXIncompleteReadsErrorzdException for :class:`dxpy.bindings.dxfile.DXFile` when returned read data is shorter than requestedNr rrrrQrQnsnrrQceZdZdZy)DXPartLengthMismatchErrorzQException raised by :class:`dxpy.bindings.dxfile.DXFile` on part length mismatch.Nr rrrrSrSqs[rrSceZdZdZy)DXChecksumMismatchErrorzNException raised by :class:`dxpy.bindings.dxfile.DXFile` on checksum mismatch.Nr rrrrUrUtsXrrUceZdZdZy) DXSearchErrorz2Exception for :mod:`dxpy.bindings.search` methods.Nr rrrrWrWwsz#format_exception..sXDT$ZXs)utils.printingr~join tracebackformat_exception_onlyr)er~s @rformat_exceptionrs0% 99XI,K,KDQRGUV,WX XXrr1c0||j|fntjdd\}}||rtjnjt |t r tjjdn:tj||D]!}tjj|#tjj||dk7r0|jdstjjdtj|y)aExits the program, printing information about the last exception (if any) and an optional error message. Uses *exception* instead if provided. :param code: Exit code. :type code: integer (valid exit code, 0-255) :param message: Message to be printed after the exception information. :type message: string :param print_tb: If set to True, prints the exception traceback; otherwise, suppresses it. :type print_tb: boolean :type exception: an exception to use in place of the last exception raised Nz^C r1r) r'sysexc_infor print_exc isinstanceKeyboardInterruptstderrwriterendswithexit)rrprint_tb exceptionexc_type exc_valuers rexit_with_exc_infors'2%.. :8; r8JHi     !  #4 5 JJ  V $!77)L '   & 'JJW"}W--d3 HHTNrTc||jdz|z}||ntjd}t|tr|t||r%t t |tjdkD|y|rrt|trbt|ddtjk(rDtjdkDrtdtjtjd y|d}t ||d |y) aExits the program, printing information about the last exception (if any) and an optional error message. Uses *exception* instead if provided. Uses **expected_exceptions** to set the error code decide whether to suppress the error traceback. :param message: Message to be printed after the exception information. :type message: string :param code: Exit code. :type code: integer (valid exit code, 0-255) :param expected_exceptions: Exceptions for which to exit with error code 3 (expected error condition) and suppress the stack trace (unless the _DX_DEBUG environment variable is set). :type expected_exceptions: iterable :param arg_parser: argparse.ArgumentParser object used in the program (optional) :param ignore_sigpipe: Whether to exit silently with code 3 when IOError with code EPIPE is raised. Default true. :type ignore_sigpipe: boolean :param exception: an exception to use in place of the last exception raised Nr$r}r)rrerrnoz Broken pipe)filerT)progrrr SystemExitrEXPECTED_ERR_EXIT_STATUSdxpy_DEBUGIOErrorgetattrrEPIPEprintrr)rrexpected_exceptions arg_parserignore_sigpiperexcs rerr_exitrs&//D(72 ,)#,,.2CC#z" C, -3Wt{{UVbkl JsG4gt9TX]XcXc9c ;;? -cjj 1  <D449Mr)r}r1FN)Gr __future__rrrrrr.rrsocketurllib3.exceptionsrrurllib3sslr Exceptionr rr4r6r9r;r=r?rBrDrFrHrKrMrOrQrSrUrWrYr[r]r_rbrdrfrirl ValueErrorrsruAttributeErrorr{rr exceptions ProtocolErrorNewConnectionError DecodeErrorConnectTimeoutErrorReadTimeoutErrorconnectionpool HTTPExceptionSSLErrorrConnectionResetErrornetwork_exceptionsdecoderJSONDecodeErrorjson_exceptionsrdefault_expected_exceptionsrrrrrs"SR  (  5i5>?J?>J>gzgrJr[[KzK[:[K:KO*OB:BBJBDD>'>oWo\ \YkY=G=BGBUU575 |  w  #3   9 Z $ $. Y:((66((;;((44((<<((99,,::((11llll* -$||335O1?Bj4>4EFGGd8S`d D"N$!mOs I..I5